2025-06-30- New publication
Gene regulatory network integration with multi-omics data enhances survival predictions in cancer. Briefings in Bioinformatics
Publications page.
2025-06-25- New preprint
inMOTIFin: a lightweight end-to-end simulation software for regulatory sequences. bioRxiv
Publications page.
2025-06-13- New preprint
HiFIseek: gene-specific enrichment of high-impact mutations in associated genomic regions. bioRxiv
Publications page.
2025-03-13- New preprint
SUMOylation Restricts Adaptive Thermogenesis by Suppressing Beiging Gene Networks. bioRxiv
Publications page.
2024-12-22- New preprint
Perspective on recent developments and challenges in regulatory and systems genomics. bioRxiv
Publications page.
2024-11-07- New preprint
Gene regulatory network integration with multi-omics data enhances survival predictions in cancer. bioRxiv
Publications page.
2024-10-22- New publication
Improving bioinformatics software quality through teamwork. Bioinformatics
Publications page.
2024-10-08- New PhD!
Congratulations to Ieva for an outstanding PhD defense. We have a new Doctor!
2024-09-02- New group member
Welcome to Damla Övek who joins the group as a postdoctoral fellow!
2024-09-01- New publication
Identification of transcription factor co-binding patterns with non-negative matrix factorization. Nucleic Acids Research.
Publications page.
2024-08-01- New group member
Welcome to Eirik Høye who joins the group as a postdoctoral fellow!
2024-05-28- New preprint
CAVACHON: a hierarchical variational autoencoder to integrate multi-modal single-cell data. aRxiv
Publications page.
2024-05-20- New publication
Copy number alterations: a catastrophic orchestration of the breast cancer genome. Trends in Molecular Medicine.
Publications page.
2024-03-07- Open position
We have an open postdoc position to fill. More info on jobbnorge.
2024-02-28 PhD defence
Dr. Rafael Riudavets Puig successfully defended his PhD thesis! Congrats Rafa!
2024-02-19 New publication
Coagulation factor V in breast cancer: A p53 regulated tumor suppressor and predictive marker for treatment response to chemotherapy. Journal of Thrombosis and Haemostasis.
Publications page.
2023-11-14 New publication
JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Research.
Publications page.
2023-11-13- New funding
We are happy to share that the Norwegian Cancer Society has awarded funding to our project with NOK 7.5 millions over 4 years.
Funding.
2023-11-11- Open position
We have an open postdoc position to fill. More info on jobbnorge.
2023-09-24- New preprint
Integrative pan-cancer analysis reveals a common architecture of dysregulated transcriptional networks characterized by loss of enhancer methylation. bioRxiv
Publications page.
2023-05-11- New publication
OnTarget: in silico design of MiniPromoters for targeted delivery of expression. Nucleic Acids Research
Publications page.
2023-04-29- New preprint
Identification of transcription factor co-binding patterns with non-negative matrix factorization. bioRxiv
Publications page.
2023-02-20- Associate Director
Thrilled to announce that, as of March 1st, Anthony will start as the Associate Director of NCMM and as a 20% adjunct Professor II at the Centre for Bioinformatics, UiO.
2022-12-08- New publication
Cis-regulatory mutations associate with transcriptional and post-transcriptional deregulation of gene regulatory programs in cancers. Nucleic Acids Research
Publications page.
2022-11-30- New publication
MoDLE: high-performance stochastic modeling of DNA loop extrusion interactions. Genome Biology
Publications page.
2022-08-18- New publication
Subtype and cell type specific expression of lncRNAs provide insight into breast cancer. Communications Biology
Publications page.
2022-04-19- New publication
Pioneer transcription factors are associated with the modulation of DNA methylation patterns across cancers. Epigenetics and Chromatin
Publications page.
2022-04-14- New preprint
MoDLE: High-performance stochastic modeling of DNA loop extrusion interactions. bioRxiv
Publications page.
2022-04-06- Interview
Anthony was interviewed by the Medical Faculty to share his thoughts on good work environment, good interactions, and team building in research as part of the Inspirational leadership section. See interview.
Computational Biology & Gene Regulation 